EuGeneMarkhmm_accuracy

GeneMark.HMM
(eukaryotic)

Accuracy

	A. thaliana
		supervised	supervised
		GM.hmm.3	GenScan
Exact exons
All	Sn	87	61
	Sp	81	70
Initial	Sn	74	43
	Sp	68	65
Internal	Sn	92	68
	Sp	87	72
Termination	Sn	82	51
	Sp	73	69

Sites
Initiation	Sn	78	46
	Sp	71	70
Termination	Sn	86	55
	Sp	77	75
Donor	Sn	94	75
	Sp	88	84
Acceptor	Sn	94	72
	Sp	88	79

	C. elegans
		supervised
		GM.hmm.3
Exact exons
All	Sn	90
	Sp	84
Initial	Sn	81
	Sp	64
Internal	Sn	91
	Sp	89
Termination	Sn	95
	Sp	75

Sites
Initiation	Sn	82
	Sp	65
Termination	Sn	95
	Sp	75
Donor	Sn	93
	Sp	89
Acceptor	Sn	96
	Sp	91







	D. melanogaster
		supervised
		GM.hmm.3
Exact exons
All	Sn	85
	Sp	86
Initial	Sn	81
	Sp	77
Internal	Sn	85
	Sp	90
Termination	Sn	89
	Sp	84

Sites
Initiation	Sn	83
	Sp	79
Termination	Sn	93
	Sp	88
Donor	Sn	90
	Sp	92
Acceptor	Sn	90
	Sp	92



	O.sativa	supervised
		GM.hmm.3
Exact exons
All	Sn	93
	Sp	92
Initial	Sn	88
	Sp	84
Internal	Sn	97
	Sp	99
Termination	Sn	89
	Sp	85

Sites
Initiation	Sn	91
	Sp	87
Termination	Sn	95
	Sp	90
Donor	Sn	96
	Sp	97
Acceptor	Sn	95
	Sp	95

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